The genome sequence and gene annotation files for both Nipponbare (japonica) and 93-11 (indica) rice cultivars are available for download. These files include the assembled genome sequences in FASTA format and gene annotations in GFF3 format.

Nipponbare (Japonica):

  • NIP_genome_final.fa — Genome assembly (FASTA, 364 MB)

  • NIP_genome_gene_final.gff — Gene annotation (GFF3, 28 MB)

93-11 (Indica):

  • 9311_genome_final.fa — Genome assembly (FASTA, 378 MB)

  • 9311_genome_gene_final.gff — Gene annotation (GFF3, 29 MB)