Information for 5-YCATCKAMTA (Motif 3)

A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
Reverse Opposite:
C G A T C T G A A C T G A G C T T G A C A C T G C T G A A G C T C T A G T C A G
p-value:1e-3018
log p-value:-6.950e+03
Information Content per bp:1.576
Number of Target Sequences with motif141674.0
Percentage of Target Sequences with motif20.24%
Number of Background Sequences with motif104585.5
Percentage of Background Sequences with motif14.99%
Average Position of motif in Targets100.1 +/- 48.9bp
Average Position of motif in Background99.8 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-YCATCKAMTA-
YYYACCTACCWH
 A C G T A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A A C G T
G A C T G A C T G A T C C G T A G T A C A G T C G C A T C G T A G T A C G A T C G C A T G C T A

MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:YCATCKAMTA
YYACCTAMYT
 A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
G A C T A G T C C G T A G T A C A G T C G C A T C G T A G T C A G A T C G C A T

MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-YCATCKAMTA-
HYCACCWACCHH
 A C G T A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A A C G T
G A C T G A T C G A T C G C T A G T A C A G T C G C T A C T G A G T A C G A T C G C T A G A C T

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YCATCKAMTA
TTATCGATTA
 A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YCATCKAMTA
NTATCGATTA
 A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YCATCKAMTA
CCAACYACCW
 A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
G A T C A G T C C G T A G T C A A G T C G A C T C T G A G T A C G A T C G C T A

MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-YCATCKAMTA
HYCACCTACC-
 A C G T A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
G A T C A G T C G A T C C T G A G T A C A G T C G C A T C G T A G T A C G A T C A C G T

MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YCATCKAMTA
YYYACCWACY-
 A C G T A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
A G C T G A C T A G T C C G T A G T A C A G T C G C A T C G T A G T A C G A T C A C G T

MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YCATCKAMTA-
TYYACCTAMYTW
 A C G T A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A A C G T
G A C T G A C T G A C T G C T A G T A C G T A C G C A T C G T A G T C A G A C T G C A T G C A T

MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--YCATCKAMTA
TYTYACCTACCA
 A C G T A C G T A G T C G A T C T C G A G A C T T G A C A C T G C T G A T G A C A G C T G C T A
C G A T A G C T A G C T A G T C C G T A G T A C A G T C C G A T C G T A G T A C G A T C C G T A