Information for 18-ARAGRCCG (Motif 23)

C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
Reverse Opposite:
A G T C A C T G A T C G A G C T A G T C A C G T A G T C A C G T
p-value:1e-314
log p-value:-7.246e+02
Information Content per bp:1.868
Number of Target Sequences with motif28353.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif22453.5
Percentage of Background Sequences with motif3.22%
Average Position of motif in Targets99.8 +/- 55.0bp
Average Position of motif in Background99.8 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ARAGRCCG
AGAGAGG-
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
G T C A C T A G C T G A C T A G C T G A T C A G T C A G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ARAGRCCG---
-GAGSCCGAGC
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G A C G T A C G T A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ARAGRCCG
GGTTAGAGACCT
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

SRSF10(RRM)/Homo_sapiens-RNCMPT00019-PBM/HughesRNA

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARAGRCCG
AGAGAAA-
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
C G T A C T A G C G T A C T A G G T C A T G C A T G C A A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00090-PBM/HughesRNA

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARAGRCCG
AGAGAAA-
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
C G T A A C T G C G T A C T A G C G T A T G C A T G C A A C G T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARAGRCCG
RGAGAGAG
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
C T A G T C A G C T G A T C A G T G C A A C T G T C G A T C A G

SRSF10(RRM)/Homo_sapiens-RNCMPT00089-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ARAGRCCG
AGAGAAA-
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
C G T A C T A G C G T A C T A G C T G A T C G A T C G A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ARAGRCCG----
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ARAGRCCG-------
-CAGGCCNNGGCCNN
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Dof3/MA0021.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ARAGRCCG
AAAGCG--
 C G T A C T A G C G T A A C T G C T G A A T G C A G T C A C T G
C G T A C G T A C G T A A C T G A G T C T A C G A C G T A C G T