Information for 4-NBYYGAYCGGTC (Motif 2)

T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C
Reverse Opposite:
T A C G T C G A A G T C A G T C C A T G T C A G C G A T A G T C C T A G T C G A T G C A A G C T
p-value:1e-3718
log p-value:-8.562e+03
Information Content per bp:1.521
Number of Target Sequences with motif142526.0
Percentage of Target Sequences with motif20.36%
Number of Background Sequences with motif101664.2
Percentage of Background Sequences with motif14.57%
Average Position of motif in Targets99.8 +/- 45.6bp
Average Position of motif in Background99.8 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:NBYYGAYCGGTC-
------TCGTTCN
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G A T

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:NBYYGAYCGGTC----
------CCGGTTTART
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A T G C A T C G C A T G A C G T G A C T G A C T C T G A C T G A G C A T

ERF018/MA1048.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:NBYYGAYCGGTC
---TGGTCGGT-
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C
A C G T A C G T A C G T G C A T C A T G C T A G G C A T A G T C A C T G T C A G G A C T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-NBYYGAYCGGTC---
GGATTGACAGGTCNTT
 A C G T T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

ZAP1/MA0589.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:NBYYGAYCGGTC--
---GGCTCGGTCAA
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C A C G T A C G T
A C G T A C G T A C G T C T A G T C A G T A G C A C G T T A G C A C T G A C T G A C G T A G T C C G T A C G T A

YLL054C/MA0429.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:NBYYGAYCGGTC
--TCGGCCG---
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C
A C G T A C G T C G A T A G T C A T C G A C T G A G T C A G T C A C T G A C G T A C G T A C G T

YLL054C/MA0429.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:NBYYGAYCGGTC
--TCGGCCG---
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C
A C G T A C G T C G A T A G T C A T C G A C T G A G T C A G T C A C T G A C G T A C G T A C G T

MYB55/MA1041.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:NBYYGAYCGGTC
---CGGTAGGT-
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C
A C G T A C G T A C G T G A T C C T A G C A T G G A C T C G T A C T A G C A T G G A C T A C G T

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:NBYYGAYCGGTC--
-----CTCGGTCAA
 T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A C G T T A G C C T A G A C T G A C G T A G T C C G T A C G T A

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-NBYYGAYCGGTC---
NTATTGACAGGTNNTN
 A C G T T C G A A C G T A G C T G A T C T C A G G C T A A G T C G T A C C T A G T C A G A G C T A T G C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T