Information for 2-YCGYTGCCGC (Motif 6)

A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A G T C C G T A C T G A A T G C A T C G C T G A
p-value:1e-9418
log p-value:-2.169e+04
Information Content per bp:1.753
Number of Target Sequences with motif645836.0
Percentage of Target Sequences with motif24.55%
Number of Background Sequences with motif245328.4
Percentage of Background Sequences with motif19.32%
Average Position of motif in Targets99.0 +/- 53.9bp
Average Position of motif in Background100.3 +/- 101.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT5G67000/MA1261.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:YCGYTGCCGC-----
CCNCCGCCGCANCNN
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A T G C T G A C C A T G G A T C T G A C C T A G A G T C G T A C C T A G G A T C T C G A C G T A G A T C G T C A C T A G

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:YCGYTGCCGC-
---YAGCCGCC
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T
A C G T A C G T A C G T G A T C G T C A A C T G A G T C A G T C A C T G A G T C A G T C

UGA3/MA0410.1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:YCGYTGCCGC--
----TCCCGCCG
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T G C A G T C A G T C A C T G A G T C A T G C T A C G

UGA3/MA0410.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:YCGYTGCCGC--
----TCCCGCCG
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T G C A G T C A G T C A C T G A G T C A T G C T A C G

CRZ1/MA0285.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YCGYTGCCGC
-CTAAGCCAC
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C
A C G T T G A C G C A T T G C A G T C A A C T G A G T C A G T C G T C A A G T C

CRZ1/MA0285.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YCGYTGCCGC
-CTAAGCCAC
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C
A C G T T G A C G C A T T G C A G T C A A C T G A G T C A G T C G T C A A G T C

AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:YCGYTGCCGC-
---CAGCCGCC
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T
A C G T A C G T A C G T G A T C T G C A A C T G A G T C G T A C C T A G A G T C A G T C

ERF15/MA1231.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--YCGYTGCCGC---
CGCCTCCGCCGCCGC
 A C G T A C G T A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T A C G T A C G T
G A T C C T A G G A T C G A T C C G A T A G T C T G A C C T A G A G T C G T A C C T A G A G T C G T A C C T A G A G T C

ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:YCGYTGCCGC-
---CAGCCGCC
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T
A C G T A C G T A C G T A G T C T G C A A C T G A G T C G T A C A C T G A G T C A G T C

ESE1/MA1264.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:YCGYTGCCGC-----
CCNCCGCCGCCGCCN
 A G C T A T G C T A C G G A C T C G A T C T A G A G T C A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
G A T C G A T C C A T G A T G C T G A C C T A G A T G C A G T C C T A G A G T C A G T C C T A G A G T C G A T C C T A G