Information for 24-AGAGAGAGGG (Motif 22)

T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G
Reverse Opposite:
A G T C A G T C A T G C A G C T G A T C A G C T G T A C G A C T G A T C A G C T
p-value:1e-2377
log p-value:-5.474e+03
Information Content per bp:1.687
Number of Target Sequences with motif269936.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif106842.0
Percentage of Background Sequences with motif8.42%
Average Position of motif in Targets104.5 +/- 60.8bp
Average Position of motif in Background99.8 +/- 98.0bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGGG
RGAGAGAG--
 T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G
C T A G T C A G C T G A T C A G T G C A A C T G T C G A T C A G A C G T A C G T

FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGGG--
RGAGAGAGAAAG
 T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G A C G T A C G T
C T A G C T A G T C G A C T A G C G T A A T C G T C G A A C T G C T G A T C G A C T G A T A C G

RAMOSA1/MA1416.1/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AGAGAGAGGG-
GAGAGAGAGAGAGA
 A C G T A C G T A C G T T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G A C G T
C T A G T C G A C T A G T C G A A C T G G T C A A C T G G T C A A C T G G T C A A C T G T C G A C T A G C T G A

SeqBias: GA-repeat

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGGG
GAGAGAGAGA-
 A C G T T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G
C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A A C G T

Trl/dmmpmm(Down)/fly

Match Rank:5
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGGG-
GAGAGAGAGAGC
 A C G T T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G A C G T
T C A G T G C A T C A G G T C A C A T G T C G A T C A G G T C A C T A G T G C A C T A G G T A C

Trl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGGG
GAGAGAGCAA-
 A C G T T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G
T C A G T C G A A T C G G C T A A C T G G T C A T C A G G T A C T C G A T C G A A C G T

BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAGAGGG--
TAGAGAGAGAGARAR
 A C G T A C G T A C G T T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G A C G T A C G T
C A G T G C T A A C T G C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T A G C G T A C T G A C T G A C T A G

Trl/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AGAGAGAGGG---
AGAGAGAGAGNAA
 T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G A C G T A C G T A C G T
G C T A T C A G C T G A C A T G T C G A T C A G G T C A A T C G G T C A T C A G T G C A G C T A C T G A

SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA

Match Rank:9
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGAGAGAGGG
--AGAGAGG-
 T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G
A C G T A C G T G T C A C T A G C T G A C T A G C T G A T C A G T C A G A C G T

BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAGGG
GARGAGAGAGAA
 A C G T A C G T T C G A C T A G C T G A C A T G T C G A C T A G T C G A T A C G T C A G T C A G
C A T G G C T A C T A G T A C G C G T A T C A G C G T A A C T G C G T A C A T G C T G A C G T A