Information for 19-TAGTCTHCCTCC (Motif 19)

C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
Reverse Opposite:
T C A G C T A G T G C A A T C G C T A G C A G T G C T A A C T G T C G A A T G C A C G T G T C A
p-value:1e-3159
log p-value:-7.276e+03
Information Content per bp:1.614
Number of Target Sequences with motif17881.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2996.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets97.6 +/- 47.4bp
Average Position of motif in Background100.8 +/- 102.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAGTCTHCCTCC
--GGCTTCCAC-
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C C G A T A G T C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGTCTHCCTCC-
-TGTCTGDCACCT
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGTCTHCCTCC
TWGTCTGV----
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00109-PBM/HughesRNA

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGTCTHCCTCC
-----NTCCTCC
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C T A G C A C G T A G T C A G T C

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTCTHCCTCC-
--NCTTCCCGCCC
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C A C G T
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

SRSF1(RRM)/Homo_sapiens-RNCMPT00108-PBM/HughesRNA

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGTCTHCCTCC
-----NTCCTCC
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C T A G C A C G T A G T C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGTCTHCCTCC-
CTGTCTGTCACCT
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAGTCTHCCTCC
-----TTCCTCC
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C G A T A G T C A G T C C G A T A G T C A G T C

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAGTCTHCCTCC
-----NTCCTCC
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C T G A C A C G T A G T C A G T C

B52(RRM)/Drosophila_melanogaster-RNCMPT00134-PBM/HughesRNA

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TAGTCTHCCTCC
-----NCCCTCC
 C A G T T G C A T A C G A G C T T A G C C G A T G T C A G A T C T A G C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C T A G C A C G T A G T C A G T C