Motif 13

Information for 12-TGACGTCAGCGR (Motif 13)

Reverse Opposite:

p-value:	1e-5232
log p-value:	-1.205e+04
Information Content per bp:	1.915
Number of Target Sequences with motif	121943.0
Percentage of Target Sequences with motif	4.64%
Number of Background Sequences with motif	36748.9
Percentage of Background Sequences with motif	2.89%
Average Position of motif in Targets	96.3 +/- 52.9bp
Average Position of motif in Background	99.6 +/- 102.2bp
Strand Bias (log2 ratio + to - strand density)	0.4
Multiplicity (# of sites on avg that occur together)	1.17
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer

Match Rank:	1
Score:	0.89
Offset:	0
Orientation:	forward strand
Alignment:	TGACGTCAGCGR TGACGTCAKC--

TGA9/MA1348.1/Jaspar

Match Rank:	2
Score:	0.89
Offset:	-1
Orientation:	reverse strand
Alignment:	-TGACGTCAGCGR ATGACGTCATC--

bZIP50/MA1342.1/Jaspar

Match Rank:	3
Score:	0.86
Offset:	-6
Orientation:	reverse strand
Alignment:	------TGACGTCAGCGR NANNNATGACGTCATCA-

PB0004.1_Atf1_1/Jaspar

Match Rank:	4
Score:	0.86
Offset:	-4
Orientation:	forward strand
Alignment:	----TGACGTCAGCGR ACGATGACGTCATCGA

TGA10/MA1346.1/Jaspar

Match Rank:	5
Score:	0.86
Offset:	-2
Orientation:	reverse strand
Alignment:	--TGACGTCAGCGR- NGTGACGTCATCATN

TGA4/MA1335.1/Jaspar

Match Rank:	6
Score:	0.86
Offset:	0
Orientation:	forward strand
Alignment:	TGACGTCAGCGR TGACGTCATCA-

TGA3/MA1336.1/Jaspar

Match Rank:	7
Score:	0.85
Offset:	-2
Orientation:	forward strand
Alignment:	--TGACGTCAGCGR GATGACGTCATCAT

CRE(bZIP)/Promoter/Homer

Match Rank:	8
Score:	0.85
Offset:	-1
Orientation:	reverse strand
Alignment:	-TGACGTCAGCGR GTGACGTCACCG-

PB0038.1_Jundm2_1/Jaspar

Match Rank:	9
Score:	0.84
Offset:	-4
Orientation:	reverse strand
Alignment:	----TGACGTCAGCGR NCGATGACGTCATCGN

TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer

Match Rank:	10
Score:	0.84
Offset:	0
Orientation:	forward strand
Alignment:	TGACGTCAGCGR TGACGTCABC--